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MarvinSketch full changelog

MarvinSketch full changelog

MarvinSketch 23.16.0 released Nov 17, 2023 (New Release)
MarvinSketch 6.3.0 released Jun 3, 2018 (New Release)
Painting:
Bond properties are displayed on the canvas.
Clipboard handling:
When the clipboard format is not recognized as a chemical object, the format chooser dialog is not displayed and Marvin does not import anything.
MarvinSketch Menu:
The "Switch Transformation" menu item is removed from the "Edit > Transform" menu.
The "Graph Invariants" menu option is removed from the "View > Advanced" menu.
MarvinSketch Dialogs:
Look&Feel option has been eliminated from the "Preferences" dialog.
Import/Export:
CXSMILES, CXSMARTS:
R-logic is supported by the CXSMILES and CXSMARTS formats.
Atom properties of homology groups are supported by the CXSMILES/CXSMARTS formats.
CDX, CDXML:
3-letter abbreviated amino acid labels can be imported from CDX.
Name to Structure (n2s):
Japanese Name to Structure is supported. It requires a separate license.
MarvinSketch 6.1.6 released Jan 21, 2014 (New Release)
Applet:
Missing resources caused issues in applets with bridged structures. For instance, template based cleaning and pasting names did not work in these cases
MarvinSketch 6.1.5 released Jan 10, 2014 (New Release)
Applet:
The mol property change event was not fired when an empty molecule was set initially for the MarvinSketch applet. This could cause misbehaviour in cases where the client JavaScript code relied on this marker to know when the applet was initialized.
MarvinSketch 6.1.3 released Nov 11, 2013 (New Release)
MarvinSketch GUI :
MSketchPane setPiece(Molecule) method did not work, it set the molecule on the canvas instead of putting it on the cursor
Import/Export:
CXSMILES/CXSMARTS:
CXSMARTS containing valence property information was recognized and read as SMARTS.
SKC:
Some reaction was read as R-definition from SKC format.
MarvinSketch 6.1.2 released Oct 23, 2013 (New Release)
MarvinSketch Dialog:
'Zoom to scaffold' checkbox option has been added to the quot;Preferences>Save/Loadquot; tab.
Structure Checker:
External structure checker configuration file URL can be set via Java System Property.
Bugfixes:
Editing:
Electron-flow arrow could not be drawn from the A-B bond to the incipient A-C bond of an A-B-C structure.
Import/Export:
MolInputStream and MolImporter could have different format options.
MolImporter did not close its inputstream when an exception was thrown in the constructor.
MOL, SDF, RXN, RDF:
Molecule type property was allowed in SDF, CSSDF export.
The coordinates of the sequence residue imported from SCSR MOL files were wrong if the residue had three attachment point.
CDX/CDXML:
Color and text format of atom label is exported to CDX and imported from CDX and CDXML.
Graphical brackets were not imported from CDX files.

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