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CoNIFER Windows 7

CoNIFER 0.2.2 Beta

"Experience seamless file management with CoNIFER - a must-have tool for Windows 7 users."

CoNIFER, developed by Niklas Krumm, is a powerful yet simple tool for analyzing copy number variation from targeted sequencing data. With its intuitive interface and customizable parameters, CoNIFER makes CNV analysis accessible to users of all backgrounds. Its advanced algorithms and high accuracy will ensure reliable results every time. Download CoNIFER today and discover a new level of CNV analysis.

CoNIFER 0.2.2 Beta full details

File Size: 20 kB
License: Freeware
Price: FREE
Released: 2012-09-24
Downloads: Total: 751 | This Month: 0
Publisher: Niklas Krumm
Publisher URL: http://conifer.sourceforge.net/


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CoNIFER
CoNIFERCADWindows XP, Windows Vista, Windows Vista x64, Windows 7, Windows 7 x64

User Rating: 2.9 (22 votes)

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CoNIFER windows 7 compatible

CoNIFER 0.2.2 Beta full description

CoNIFER uses exome sequencing data to find copy number variants (CNVs) and genotype the copy-number of duplicated genes. As exome capture reactions are subject to strong and systematic capture biases between sample batches, we implemented singular value decomposition (SVD) to eliminate these biases in exome data.

CoNIFER offers the ability to mix exome sequence from multiple experimental runs by eliminating batch biases. Together with a short read aligner such as mrsFAST which can align reads to multiple locations, CoNIFER can robustly detect rare CNVs and estimate the copy number of duplicated genes up to ~8 copies with current exome capture kits. To get started right away, read the quick start guide.

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