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mMass full changelog

mMass full changelog

mMass 5.5.0 released Jul 8, 2013 (New Release)
Added:
· Peak list can now be exported into ASCII with column headers.
· Mass to Formula tool is now able to calculate negative compositions.

Improved:
· Form parameters updated in Protein Prospector tools.

Fixed:
· Mass to Formula tool crashed when no composition was found.
· Correct scan number is now parsed from mzML format.
mMass 5.4.1 released Dec 31, 2012 (New Release)
Fixed:
· Internal server has been disabled for OS X.
· An issue with crashing plot canvas.
· An issue with crashing Envelope Fit tool.
mMass 5.4.0 released Nov 22, 2012 (New Release)
· Improved: Multiple documents overlay in Mass Defect Plot panel.
· Improved: On Linux, system user’s folder is now used for configs and presets.
· Fixed: Incorrect handling of C-terminal modification in Peptide Fragmentation panel.
· Fixed: Incorrect calculation of some mass defects.
· Fixed: An issue with peak picking crashing on some documents.
· Fixed: An issue with mzML files with incorrect base peak intensity.
· Fixed: An issue with mzML files with unspecified retention time units.
· Fixed: Incorrect zooming style in Scan Selection dialog.
· Fixed: Updated link to ChemSpider from Mass to Formula panel.
· Fixed: Updated link to Human Metabolom Database from Mass to Formula tool.
mMass 5.3.0 released Aug 31, 2012 (New Release)
· Added: Mass Defect Plot to clusterize peaks based on their mass defect.
· Added: Swap Data function is now available in the Batch Processing panel.
· Added: Line style can be set for profile mass spectra.
· Improved: Open multiple documents via command line.
· Fixed: An issue with negatively charged ions matching.
mMass 5.2 released Jul 6, 2012 (New Release)
· Added: New spectrum canvas view option to allow ranges outside current documents boundaries.
· Improved: File association now works on all platforms via listening on port 65456.
· Improved: More detailed Spectrum Ruler info for charge and neutral mass.
· Fixed: In some cases, document selection in batch processing was unpredictable.
mMass 5.1.0 released Jun 18, 2012 (New Release)
mMass 5.0.1 released Apr 17, 2012 (New Release)
· Improved: Molecular formula of the peptide is shown in custom-type Sequence Editor.
· Fixed: Sequence Search tool did not work.
· Fixed: Sequence info did not update correctly while switching sequences.
· Fixed: Applying processing tools with no document selected may cause application to crash.
· Fixed: An issue with mzML files with different data array bits.
mMass 3.11.0 released May 11, 2011 (New Release)
· New: Simple Spectrum Generator tool for artificial mass spectra generation.
· New: Cancel button for long-running tasks.
· New: All peak picking tools are using baseline calculated according to Baseline Correction panel.
· New: Live threshold line preview is shown for Peak Picking tool according to current settings.
· New: Label Envelope tool to label isotopes or envelope centroid or to “measure” peak charge.
· New: Isotope mass shift correction parameter in Deisotoping panel.
· New: Support for MGF (Mascot Generic Format) data format.
mMass 3.10.0 released Feb 25, 2011 (New Release)
· New: Mass Filter tool to annotate or remove contaminant masses.
· New: Set Mass Range tool to specify current mass range in Spectrum Panel.
· New: Font and line scaling can be specified in Export Spectrum Image tool.
· New: Peak list filter can be specified in Match panel and protein identification tools.
· New: IDs for NCBI PubChem Compounds and NORINE peptide database are recognized in Report.
· Improved: New items in Peptide Fragmentation panel.
· Changed: Data normalization tool moved to Processing Panel.
· Changed: All annotations and sequence matches are removed when processing tools are applied.

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